One of the most important programme of DoIT is to audit the IT infrastructure of various agencies of Government of Nepal. IT Audit is on going security process to check, evaluate, and report latest threats, vulnerability and risk of the system. IT Audit programme conducted by DoIT covers the following areas of audit:

1.    Preliminary ICT Audit

2.    Documentation and Policy Audit

3.    Website, Web application and Software System Audit

4.    Hardware Audit

5.    Vulnerability Assessment and Penetration Testing

6.    Risk Assessment etc